Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TNFP01375 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TNFP01375 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFP01375 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TNFP01375 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFP01375 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TNFP01375 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 HYMAI-201ENST00000635591 3347 ntBASIC14.76□□□□□ -0.05
TNFP01375 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.76□□□□□ -0.05
TNFP01375 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFP01375 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFP01375 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFP01375 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFP01375 AC100850.1-201ENST00000506768 649 ntBASIC14.76□□□□□ -0.05
TNFP01375 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.76□□□□□ -0.05
TNFP01375 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFP01375 AC244452.3-201ENST00000636814 210 ntBASIC14.76□□□□□ -0.05
TNFP01375 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TNFP01375 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFP01375 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFP01375 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFP01375 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFP01375 AP000593.2-201ENST00000542775 1433 ntBASIC14.75□□□□□ -0.05
TNFP01375 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TNFP01375 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TNFP01375 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TNFP01375 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TNFP01375 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFP01375 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
TNFP01375 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFP01375 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFP01375 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFP01375 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFP01375 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.75□□□□□ -0.05
TNFP01375 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
TNFP01375 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFP01375 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFP01375 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFP01375 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms