Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SAMD11P1-201ENST00000571429 661 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 GNRHR2-203ENST00000581100 1187 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-CO1P00395 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MT-CO1P00395 PRSS30P-206ENST00000641773 873 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MT-CO1P00395 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
MT-CO1P00395 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MT-CO1P00395 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.6■□□□□ 0.09
MT-CO1P00395 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-CO1P00395 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.6■□□□□ 0.09
MT-CO1P00395 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-CO1P00395 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-CO1P00395 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-CO1P00395 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-CO1P00395 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-CO1P00395 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.6■□□□□ 0.09
MT-CO1P00395 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 AL359881.2-201ENST00000602973 570 ntBASIC15.6■□□□□ 0.09
MT-CO1P00395 AC244669.2-201ENST00000612320 853 ntBASIC15.6■□□□□ 0.09
MT-CO1P00395 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-CO1P00395 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-CO1P00395 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
MT-CO1P00395 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MT-CO1P00395 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MT-CO1P00395 TMBIM7P-203ENST00000641617 1718 ntBASIC15.6■□□□□ 0.09
MT-CO1P00395 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.6■□□□□ 0.09
MT-CO1P00395 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 MST1L-201ENST00000442552 2185 ntBASIC15.59■□□□□ 0.09
MT-CO1P00395 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.59■□□□□ 0.09
MT-CO1P00395 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 MIR600HG-201ENST00000449175 5984 ntBASIC15.59■□□□□ 0.09
MT-CO1P00395 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.59■□□□□ 0.09
MT-CO1P00395 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.59■□□□□ 0.09
MT-CO1P00395 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 AC104457.1-201ENST00000401024 814 ntBASIC15.59■□□□□ 0.09
MT-CO1P00395 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.59■□□□□ 0.09
MT-CO1P00395 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.59■□□□□ 0.09
MT-CO1P00395 AC007551.1-201ENST00000457394 519 ntBASIC15.59■□□□□ 0.09
MT-CO1P00395 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.59■□□□□ 0.09
MT-CO1P00395 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MT-CO1P00395 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.59■□□□□ 0.09
MT-CO1P00395 MIR6805-201ENST00000615055 62 ntBASIC15.59■□□□□ 0.09
MT-CO1P00395 AC145423.3-201ENST00000615987 467 ntBASIC15.59■□□□□ 0.09
MT-CO1P00395 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms