Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
TOP3BO95985 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TOP3BO95985 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.63■□□□□ 0.09
TOP3BO95985 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.63■□□□□ 0.09
TOP3BO95985 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.63■□□□□ 0.09
TOP3BO95985 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.63■□□□□ 0.09
TOP3BO95985 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.63■□□□□ 0.09
TOP3BO95985 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.63■□□□□ 0.09
TOP3BO95985 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.63■□□□□ 0.09
TOP3BO95985 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.63■□□□□ 0.09
TOP3BO95985 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.63■□□□□ 0.09
TOP3BO95985 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TOP3BO95985 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.63■□□□□ 0.09
TOP3BO95985 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 AL359258.3-201ENST00000622910 2331 ntBASIC15.63■□□□□ 0.09
TOP3BO95985 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.63■□□□□ 0.09
TOP3BO95985 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 AC007292.2-201ENST00000593524 1812 ntBASIC15.63■□□□□ 0.09
TOP3BO95985 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TOP3BO95985 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.63■□□□□ 0.09
TOP3BO95985 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 AC005912.2-201ENST00000619492 2400 ntBASIC15.63■□□□□ 0.09
TOP3BO95985 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TOP3BO95985 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 KRT8P12-202ENST00000472924 1397 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 AL390755.1-201ENST00000623716 2027 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TOP3BO95985 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
TOP3BO95985 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.62■□□□□ 0.09
TOP3BO95985 FAM21FP-201ENST00000426241 1131 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 AL139010.1-201ENST00000454878 894 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 PFN1P12-201ENST00000455938 534 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.62■□□□□ 0.09
TOP3BO95985 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.62■□□□□ 0.09
TOP3BO95985 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.62■□□□□ 0.09
TOP3BO95985 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.62■□□□□ 0.09
TOP3BO95985 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 AC232323.1-201ENST00000540724 2099 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 REXO1L5P-201ENST00000622260 2098 ntBASIC15.62■□□□□ 0.09
TOP3BO95985 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.62■□□□□ 0.09
TOP3BO95985 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.62■□□□□ 0.09
TOP3BO95985 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TOP3BO95985 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms