Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17■□□□□ 0.31
GGPS1O95749 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GGPS1O95749 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 AC012508.2-201ENST00000567613 1472 ntBASIC16.99■□□□□ 0.31
GGPS1O95749 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GGPS1O95749 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.99■□□□□ 0.31
GGPS1O95749 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GGPS1O95749 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 TMBIM7P-203ENST00000641617 1718 ntBASIC16.99■□□□□ 0.31
GGPS1O95749 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GGPS1O95749 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.99■□□□□ 0.31
GGPS1O95749 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 HIST2H2BB-201ENST00000449108 381 ntBASIC16.99■□□□□ 0.31
GGPS1O95749 AC004898.1-201ENST00000451057 766 ntBASIC16.99■□□□□ 0.31
GGPS1O95749 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GGPS1O95749 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.99■□□□□ 0.31
GGPS1O95749 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.99■□□□□ 0.31
GGPS1O95749 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.99■□□□□ 0.31
GGPS1O95749 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GGPS1O95749 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.99■□□□□ 0.31
GGPS1O95749 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.99■□□□□ 0.31
GGPS1O95749 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.99■□□□□ 0.31
GGPS1O95749 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GGPS1O95749 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.99■□□□□ 0.31
GGPS1O95749 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GGPS1O95749 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 AC144831.1-201ENST00000573312 2656 ntBASIC16.98■□□□□ 0.31
GGPS1O95749 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GGPS1O95749 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
GGPS1O95749 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.98■□□□□ 0.31
GGPS1O95749 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.98■□□□□ 0.31
GGPS1O95749 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.98■□□□□ 0.31
GGPS1O95749 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.98■□□□□ 0.31
GGPS1O95749 POM121L10P-201ENST00000436994 1285 ntBASIC16.98■□□□□ 0.31
GGPS1O95749 CHMP1AP1-201ENST00000445563 662 ntBASIC16.98■□□□□ 0.31
GGPS1O95749 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.98■□□□□ 0.31
GGPS1O95749 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GGPS1O95749 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.98■□□□□ 0.31
GGPS1O95749 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.98■□□□□ 0.31
GGPS1O95749 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.98■□□□□ 0.31
GGPS1O95749 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GGPS1O95749 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GGPS1O95749 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 FKBP4P6-201ENST00000457486 1332 ntBASIC16.97■□□□□ 0.31
GGPS1O95749 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.97■□□□□ 0.31
GGPS1O95749 SSR4P1-203ENST00000599569 2260 ntBASIC16.97■□□□□ 0.31
GGPS1O95749 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.97■□□□□ 0.31
GGPS1O95749 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GGPS1O95749 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GGPS1O95749 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.97■□□□□ 0.31
GGPS1O95749 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GGPS1O95749 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GGPS1O95749 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GGPS1O95749 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms