Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMC2O95347 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.26■□□□□ 0.35
SMC2O95347 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMC2O95347 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.26■□□□□ 0.35
SMC2O95347 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMC2O95347 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.25■□□□□ 0.35
SMC2O95347 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.25■□□□□ 0.35
SMC2O95347 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SMC2O95347 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.25■□□□□ 0.35
SMC2O95347 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.25■□□□□ 0.35
SMC2O95347 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.25■□□□□ 0.35
SMC2O95347 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SMC2O95347 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SMC2O95347 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.25■□□□□ 0.35
SMC2O95347 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.25■□□□□ 0.35
SMC2O95347 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.25■□□□□ 0.35
SMC2O95347 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.25■□□□□ 0.35
SMC2O95347 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMC2O95347 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMC2O95347 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMC2O95347 MTHFR-210ENST00000641407 2387 ntBASIC17.25■□□□□ 0.35
SMC2O95347 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMC2O95347 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMC2O95347 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMC2O95347 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMC2O95347 AC041040.2-201ENST00000622926 2899 ntBASIC17.24■□□□□ 0.35
SMC2O95347 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.24■□□□□ 0.35
SMC2O95347 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMC2O95347 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 BX640514.1-201ENST00000583223 1918 ntBASIC17.24■□□□□ 0.35
SMC2O95347 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SMC2O95347 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.24■□□□□ 0.35
SMC2O95347 TSEN15P1-201ENST00000423257 515 ntBASIC17.24■□□□□ 0.35
SMC2O95347 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.24■□□□□ 0.35
SMC2O95347 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.24■□□□□ 0.35
SMC2O95347 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.24■□□□□ 0.35
SMC2O95347 AC125807.1-201ENST00000483097 614 ntBASIC17.24■□□□□ 0.35
SMC2O95347 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMC2O95347 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SMC2O95347 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 Z92544.3-201ENST00000624747 417 ntBASIC17.24■□□□□ 0.35
SMC2O95347 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.24■□□□□ 0.35
SMC2O95347 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.24■□□□□ 0.35
SMC2O95347 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMC2O95347 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 PTENP1-202ENST00000532280 3996 ntBASIC17.24■□□□□ 0.35
SMC2O95347 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMC2O95347 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SMC2O95347 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMC2O95347 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms