Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GPC4O75487 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GPC4O75487 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.32■□□□□ 0.04
GPC4O75487 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GPC4O75487 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.31■□□□□ 0.04
GPC4O75487 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GPC4O75487 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 AC232323.1-201ENST00000540724 2099 ntBASIC15.31■□□□□ 0.04
GPC4O75487 REXO1L5P-201ENST00000622260 2098 ntBASIC15.31■□□□□ 0.04
GPC4O75487 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GPC4O75487 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.31■□□□□ 0.04
GPC4O75487 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 RPL5P21-201ENST00000404620 815 ntBASIC15.31■□□□□ 0.04
GPC4O75487 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.31■□□□□ 0.04
GPC4O75487 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.31■□□□□ 0.04
GPC4O75487 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 FAM207CP-201ENST00000443486 507 ntBASIC15.31■□□□□ 0.04
GPC4O75487 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 SERBP1P5-201ENST00000510079 1181 ntBASIC15.31■□□□□ 0.04
GPC4O75487 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 RARRES2P5-201ENST00000564013 466 ntBASIC15.31■□□□□ 0.04
GPC4O75487 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
GPC4O75487 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.31■□□□□ 0.04
GPC4O75487 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GPC4O75487 AC005089.1-201ENST00000619486 2241 ntBASIC15.31■□□□□ 0.04
GPC4O75487 FGD5P1-202ENST00000614866 2498 ntBASIC15.31■□□□□ 0.04
GPC4O75487 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GPC4O75487 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GPC4O75487 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.3■□□□□ 0.04
GPC4O75487 SPDYE19P-201ENST00000338590 713 ntBASIC15.3■□□□□ 0.04
GPC4O75487 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC4O75487 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.3■□□□□ 0.04
GPC4O75487 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.3■□□□□ 0.04
GPC4O75487 HMGN1P19-201ENST00000436976 333 ntBASIC15.3■□□□□ 0.04
GPC4O75487 GNAQP1-201ENST00000444815 1067 ntBASIC15.3■□□□□ 0.04
GPC4O75487 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.3■□□□□ 0.04
GPC4O75487 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC4O75487 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 AC023310.3-201ENST00000557027 670 ntBASIC15.3■□□□□ 0.04
GPC4O75487 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.3■□□□□ 0.04
GPC4O75487 AC100756.1-201ENST00000562736 682 ntBASIC15.3■□□□□ 0.04
GPC4O75487 AC138749.3-201ENST00000567691 622 ntBASIC15.3■□□□□ 0.04
GPC4O75487 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
GPC4O75487 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.3■□□□□ 0.04
GPC4O75487 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC4O75487 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GPC4O75487 AC116165.1-201ENST00000611806 668 ntBASIC15.3■□□□□ 0.04
GPC4O75487 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.3■□□□□ 0.04
GPC4O75487 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.3■□□□□ 0.04
GPC4O75487 AL390755.1-201ENST00000623716 2027 ntBASIC15.3■□□□□ 0.04
GPC4O75487 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms