Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE3O75131 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CPNE3O75131 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE3O75131 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CPNE3O75131 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE3O75131 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.69□□□□□ -0.06
CPNE3O75131 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPNE3O75131 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 AC093525.8-201ENST00000624099 1342 ntBASIC14.68□□□□□ -0.06
CPNE3O75131 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE3O75131 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CPNE3O75131 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.68□□□□□ -0.06
CPNE3O75131 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CPNE3O75131 AC099336.1-201ENST00000417053 1171 ntBASIC14.68□□□□□ -0.06
CPNE3O75131 FAM21FP-201ENST00000426241 1131 ntBASIC14.68□□□□□ -0.06
CPNE3O75131 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE3O75131 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE3O75131 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE3O75131 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE3O75131 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.68□□□□□ -0.06
CPNE3O75131 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.68□□□□□ -0.06
CPNE3O75131 BX539320.1-201ENST00000623759 877 ntBASIC14.68□□□□□ -0.06
CPNE3O75131 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 AC026748.1-201ENST00000624349 3251 ntBASIC14.68□□□□□ -0.06
CPNE3O75131 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CPNE3O75131 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE3O75131 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE3O75131 AL138799.1-201ENST00000448213 1675 ntBASIC14.68□□□□□ -0.06
CPNE3O75131 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE3O75131 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE3O75131 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CPNE3O75131 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CPNE3O75131 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.67□□□□□ -0.06
CPNE3O75131 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.67□□□□□ -0.06
CPNE3O75131 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE3O75131 KRT90P-201ENST00000549264 1064 ntBASIC14.67□□□□□ -0.06
CPNE3O75131 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.67□□□□□ -0.06
CPNE3O75131 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.67□□□□□ -0.06
CPNE3O75131 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE3O75131 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CPNE3O75131 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CPNE3O75131 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CPNE3O75131 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CPNE3O75131 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE3O75131 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE3O75131 AC022532.1-201ENST00000624563 1728 ntBASIC14.66□□□□□ -0.06
CPNE3O75131 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms