Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSSCA1O60232 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SSSCA1O60232 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SSSCA1O60232 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SSSCA1O60232 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SSSCA1O60232 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SSSCA1O60232 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.46□□□□□ -0.42
SSSCA1O60232 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.46□□□□□ -0.42
SSSCA1O60232 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SSSCA1O60232 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSSCA1O60232 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.46□□□□□ -0.42
SSSCA1O60232 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.45□□□□□ -0.42
SSSCA1O60232 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSSCA1O60232 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.45□□□□□ -0.42
SSSCA1O60232 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSSCA1O60232 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.45□□□□□ -0.42
SSSCA1O60232 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.45□□□□□ -0.42
SSSCA1O60232 EMBP1-201ENST00000458200 901 ntBASIC12.45□□□□□ -0.42
SSSCA1O60232 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 AP002472.1-201ENST00000577490 586 ntBASIC12.45□□□□□ -0.42
SSSCA1O60232 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.45□□□□□ -0.42
SSSCA1O60232 AC116407.3-201ENST00000623905 1129 ntBASIC12.45□□□□□ -0.42
SSSCA1O60232 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SSSCA1O60232 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 AC055811.4-201ENST00000624039 1754 ntBASIC12.45□□□□□ -0.42
SSSCA1O60232 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSSCA1O60232 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
SSSCA1O60232 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SSSCA1O60232 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.45□□□□□ -0.42
SSSCA1O60232 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSSCA1O60232 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 CICP20-201ENST00000443330 2801 ntBASIC12.44□□□□□ -0.42
SSSCA1O60232 CICP8-201ENST00000455800 2813 ntBASIC12.44□□□□□ -0.42
SSSCA1O60232 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SSSCA1O60232 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSSCA1O60232 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms