Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC079776.4-201ENST00000511039 504 ntBASIC11.47□□□□□ -0.57
SNAI2O43623 RNA5SP410-201ENST00000516285 106 ntBASIC11.47□□□□□ -0.57
SNAI2O43623 RNA5SP415-201ENST00000517246 115 ntBASIC11.47□□□□□ -0.57
SNAI2O43623 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.47□□□□□ -0.57
SNAI2O43623 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.47□□□□□ -0.57
SNAI2O43623 RARRES2P8-201ENST00000566335 367 ntBASIC11.47□□□□□ -0.57
SNAI2O43623 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
SNAI2O43623 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.47□□□□□ -0.57
SNAI2O43623 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.47□□□□□ -0.57
SNAI2O43623 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.47□□□□□ -0.57
SNAI2O43623 AL049840.3-201ENST00000602669 611 ntBASIC11.47□□□□□ -0.57
SNAI2O43623 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.47□□□□□ -0.57
SNAI2O43623 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.47□□□□□ -0.57
SNAI2O43623 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.47□□□□□ -0.57
SNAI2O43623 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SNAI2O43623 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.47□□□□□ -0.57
SNAI2O43623 ACE3P-201ENST00000423435 1973 ntBASIC11.47□□□□□ -0.57
SNAI2O43623 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.47□□□□□ -0.57
SNAI2O43623 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.46□□□□□ -0.57
SNAI2O43623 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
SNAI2O43623 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.46□□□□□ -0.57
SNAI2O43623 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.46□□□□□ -0.57
SNAI2O43623 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.46□□□□□ -0.57
SNAI2O43623 AL031284.1-201ENST00000419297 478 ntBASIC11.46□□□□□ -0.57
SNAI2O43623 AC142381.1-201ENST00000426099 345 ntBASIC11.46□□□□□ -0.57
SNAI2O43623 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.46□□□□□ -0.57
SNAI2O43623 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.46□□□□□ -0.57
SNAI2O43623 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.46□□□□□ -0.57
SNAI2O43623 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.46□□□□□ -0.57
SNAI2O43623 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.46□□□□□ -0.57
SNAI2O43623 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.46□□□□□ -0.57
SNAI2O43623 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 AC116407.3-201ENST00000623905 1129 ntBASIC11.46□□□□□ -0.57
SNAI2O43623 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SNAI2O43623 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SNAI2O43623 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.46□□□□□ -0.58
SNAI2O43623 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.46□□□□□ -0.58
SNAI2O43623 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.58
SNAI2O43623 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SNAI2O43623 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.46□□□□□ -0.58
SNAI2O43623 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms