Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.45■□□□□ 0.06
RIPK2O43353 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.45■□□□□ 0.06
RIPK2O43353 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.45■□□□□ 0.06
RIPK2O43353 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.45■□□□□ 0.06
RIPK2O43353 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 LINC01115-203ENST00000606068 577 ntBASIC15.45■□□□□ 0.06
RIPK2O43353 C20orf181-201ENST00000623918 480 ntBASIC15.45■□□□□ 0.06
RIPK2O43353 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RIPK2O43353 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.45■□□□□ 0.06
RIPK2O43353 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RIPK2O43353 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.45■□□□□ 0.06
RIPK2O43353 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RIPK2O43353 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 KRT18P32-201ENST00000424695 1287 ntBASIC15.44■□□□□ 0.06
RIPK2O43353 AC005237.2-201ENST00000434368 219 ntBASIC15.44■□□□□ 0.06
RIPK2O43353 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 AC022145.2-201ENST00000598203 171 ntBASIC15.44■□□□□ 0.06
RIPK2O43353 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.44■□□□□ 0.06
RIPK2O43353 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RIPK2O43353 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.44■□□□□ 0.06
RIPK2O43353 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RIPK2O43353 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RIPK2O43353 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 AC090505.1-201ENST00000430515 1834 ntBASIC15.43■□□□□ 0.06
RIPK2O43353 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RIPK2O43353 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RIPK2O43353 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.43■□□□□ 0.06
RIPK2O43353 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.43■□□□□ 0.06
RIPK2O43353 MKNK2P1-201ENST00000437526 628 ntBASIC15.43■□□□□ 0.06
RIPK2O43353 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.43■□□□□ 0.06
RIPK2O43353 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.43■□□□□ 0.06
RIPK2O43353 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.43■□□□□ 0.06
RIPK2O43353 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.43■□□□□ 0.06
RIPK2O43353 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.43■□□□□ 0.06
RIPK2O43353 AC105339.1-204ENST00000636249 355 ntBASIC15.43■□□□□ 0.06
RIPK2O43353 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RIPK2O43353 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.43■□□□□ 0.06
RIPK2O43353 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms