Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 AC018735.1-201ENST00000437208 1502 ntBASIC15.18■□□□□ 0.02
MID1O15344 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.18■□□□□ 0.02
MID1O15344 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.18■□□□□ 0.02
MID1O15344 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.18■□□□□ 0.02
MID1O15344 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.18■□□□□ 0.02
MID1O15344 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.18■□□□□ 0.02
MID1O15344 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.18■□□□□ 0.02
MID1O15344 MESTP3-201ENST00000503460 968 ntBASIC15.18■□□□□ 0.02
MID1O15344 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.18■□□□□ 0.02
MID1O15344 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.18■□□□□ 0.02
MID1O15344 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
MID1O15344 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.18■□□□□ 0.02
MID1O15344 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.18■□□□□ 0.02
MID1O15344 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.18■□□□□ 0.02
MID1O15344 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.18■□□□□ 0.02
MID1O15344 AC244157.2-201ENST00000616239 1006 ntBASIC15.18■□□□□ 0.02
MID1O15344 AL139099.5-201ENST00000635274 300 ntBASIC15.18■□□□□ 0.02
MID1O15344 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 AC012508.2-201ENST00000567613 1472 ntBASIC15.18■□□□□ 0.02
MID1O15344 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MID1O15344 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MID1O15344 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MID1O15344 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.18■□□□□ 0.02
MID1O15344 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.17■□□□□ 0.02
MID1O15344 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
MID1O15344 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
MID1O15344 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
MID1O15344 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 HIST2H2BB-201ENST00000449108 381 ntBASIC15.17■□□□□ 0.02
MID1O15344 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.17■□□□□ 0.02
MID1O15344 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.17■□□□□ 0.02
MID1O15344 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
MID1O15344 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.17■□□□□ 0.02
MID1O15344 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MID1O15344 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MID1O15344 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.17■□□□□ 0.02
MID1O15344 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.17■□□□□ 0.02
MID1O15344 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 PAUPAR-201ENST00000630360 2965 ntBASIC15.17■□□□□ 0.02
MID1O15344 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.17■□□□□ 0.02
MID1O15344 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
MID1O15344 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MID1O15344 FKBP4P6-201ENST00000457486 1332 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms