Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2A1O14983 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2A1O14983 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP2A1O14983 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.3■□□□□ 0.36
ATP2A1O14983 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ATP2A1O14983 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ATP2A1O14983 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2A1O14983 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2A1O14983 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2A1O14983 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 IGHJ2P-201ENST00000454480 60 ntBASIC17.3■□□□□ 0.36
ATP2A1O14983 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 AC044849.1-201ENST00000519737 1188 ntBASIC17.3■□□□□ 0.36
ATP2A1O14983 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2A1O14983 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.3■□□□□ 0.36
ATP2A1O14983 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2A1O14983 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2A1O14983 AL358472.3-201ENST00000608147 415 ntBASIC17.3■□□□□ 0.36
ATP2A1O14983 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2A1O14983 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ATP2A1O14983 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP2A1O14983 AC020658.6-201ENST00000623564 1870 ntBASIC17.3■□□□□ 0.36
ATP2A1O14983 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2A1O14983 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2A1O14983 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.3■□□□□ 0.36
ATP2A1O14983 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2A1O14983 AC092850.2-201ENST00000623821 2697 ntBASIC17.3■□□□□ 0.36
ATP2A1O14983 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2A1O14983 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP2A1O14983 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ATP2A1O14983 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ATP2A1O14983 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP2A1O14983 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2A1O14983 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2A1O14983 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP2A1O14983 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 NDUFV2P1-201ENST00000596415 907 ntBASIC17.29■□□□□ 0.36
ATP2A1O14983 AC138649.2-201ENST00000615886 705 ntBASIC17.29■□□□□ 0.36
ATP2A1O14983 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2A1O14983 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP2A1O14983 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2A1O14983 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ATP2A1O14983 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A1O14983 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2A1O14983 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2A1O14983 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A1O14983 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A1O14983 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A1O14983 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP2A1O14983 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms