Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXN3O00409 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
FOXN3O00409 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 AC113367.3-201ENST00000508316 1912 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXN3O00409 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
FOXN3O00409 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
FOXN3O00409 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXN3O00409 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 RNU1-114P-201ENST00000365297 166 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXN3O00409 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 SOCS2P1-201ENST00000417727 557 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXN3O00409 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXN3O00409 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 DUX4L47-201ENST00000566374 394 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 AC133539.2-201ENST00000604757 467 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 AC008494.3-201ENST00000606615 944 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FOXN3O00409 KRT8P14-201ENST00000414254 1442 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
FOXN3O00409 PCDHA3-202ENST00000532566 4594 ntBASIC16.25■□□□□ 0.19
FOXN3O00409 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXN3O00409 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
FOXN3O00409 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FOXN3O00409 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXN3O00409 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXN3O00409 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXN3O00409 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
FOXN3O00409 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.24■□□□□ 0.19
FOXN3O00409 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.24■□□□□ 0.19
FOXN3O00409 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 AL355385.1-201ENST00000606123 409 ntBASIC16.24■□□□□ 0.19
FOXN3O00409 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 AC005252.2-201ENST00000624630 1141 ntBASIC16.24■□□□□ 0.19
FOXN3O00409 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 AC015656.1-201ENST00000624209 3578 ntBASIC16.24■□□□□ 0.19
FOXN3O00409 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXN3O00409 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXN3O00409 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXN3O00409 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms