Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 KLF2-202ENST00000592003 564 ntTSL 3 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 AC011477.6-201ENST00000604980 1927 ntBASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 BAHD1-201ENST00000416165 4526 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHKB-CPT1BH3BT56 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AC152010.1-201ENST00000415779 2006 ntBASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 MIR4758-201ENST00000577688 71 ntBASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AC019129.2-201ENST00000609837 1235 ntBASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 AC073912.3-201ENST00000624414 853 ntBASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 CABP2-204ENST00000636477 941 ntTSL 5 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHKB-CPT1BH3BT56 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 312.3 ms