Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 RPS2P1-201ENST00000434010 821 ntBASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 SLC25A6P2-201ENST00000497974 877 ntBASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 AC006557.2-201ENST00000592985 1240 ntBASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRCH1Q9Y2L9 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 AC021097.1-201ENST00000607902 574 ntBASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 AC008735.5-201ENST00000623544 497 ntBASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 FAM90A12P-201ENST00000519497 2375 ntBASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 FAM90A24P-201ENST00000520792 2369 ntBASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRCH1Q9Y2L9 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms