Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.03■□□□□ 0.64
SCN11AQ9UI33 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN11AQ9UI33 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN11AQ9UI33 RN7SL736P-201ENST00000613111 269 ntBASIC19.03■□□□□ 0.64
SCN11AQ9UI33 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN11AQ9UI33 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN11AQ9UI33 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SCN11AQ9UI33 AC013268.4-201ENST00000637413 2228 ntBASIC19.02■□□□□ 0.64
SCN11AQ9UI33 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AC009093.10-201ENST00000641956 1442 ntBASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AL136172.1-201ENST00000598590 1394 ntBASIC19.02■□□□□ 0.64
SCN11AQ9UI33 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AL583805.1-201ENST00000391389 531 ntBASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AC092580.1-201ENST00000433998 658 ntBASIC19.02■□□□□ 0.64
SCN11AQ9UI33 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AC003686.1-201ENST00000550956 1034 ntBASIC19.02■□□□□ 0.64
SCN11AQ9UI33 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 AC009145.4-201ENST00000625119 1294 ntBASIC19.02■□□□□ 0.64
SCN11AQ9UI33 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN11AQ9UI33 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN11AQ9UI33 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SCN11AQ9UI33 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SCN11AQ9UI33 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN11AQ9UI33 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN11AQ9UI33 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SCN11AQ9UI33 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 RPS9P1-201ENST00000419943 583 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 AC078991.1-201ENST00000437297 610 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 CTBP2P4-201ENST00000513884 920 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 POU5F1P2-201ENST00000521750 823 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 AC005632.3-201ENST00000605544 308 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 AC005618.3-201ENST00000624928 458 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 AC011491.1-203ENST00000637688 543 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 AL805961.1-201ENST00000642026 753 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 AC091951.1-201ENST00000512854 2465 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 MIR4522-201ENST00000584932 87 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SCN11AQ9UI33 COX6A1P2-201ENST00000620597 330 ntBASIC19.01■□□□□ 0.63
SCN11AQ9UI33 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SCN11AQ9UI33 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19■□□□□ 0.63
SCN11AQ9UI33 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19■□□□□ 0.63
SCN11AQ9UI33 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SCN11AQ9UI33 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SCN11AQ9UI33 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN11AQ9UI33 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms