Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 AC005089.1-201ENST00000619486 2241 ntBASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 Z82170.1-201ENST00000625081 3192 ntBASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
LINC00474Q9P2X8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.02□□□□□ -0.8
LINC00474Q9P2X8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AC117489.1-201ENST00000625169 3217 ntBASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 TSSK5P-201ENST00000423978 907 ntBASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AC044860.1-202ENST00000559481 777 ntBASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AL096865.1-201ENST00000606796 927 ntBASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 AL023775.1-201ENST00000454907 1746 ntBASIC10.02□□□□□ -0.81
LINC00474Q9P2X8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 AC018892.3-201ENST00000623986 2499 ntBASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00474Q9P2X8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms