Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ENPP7P5-201ENST00000541031 1031 ntBASIC14.28□□□□□ -0.12
CNIH4Q9P003 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 INTS4P2-202ENST00000614726 2019 ntBASIC14.28□□□□□ -0.12
CNIH4Q9P003 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
CNIH4Q9P003 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNIH4Q9P003 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 ZBED1P1-201ENST00000502364 1930 ntBASIC14.27□□□□□ -0.12
CNIH4Q9P003 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CNIH4Q9P003 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 KRT8P22-201ENST00000562317 1415 ntBASIC14.27□□□□□ -0.12
CNIH4Q9P003 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.27□□□□□ -0.12
CNIH4Q9P003 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CNIH4Q9P003 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 SOCS2P1-201ENST00000417727 557 ntBASIC14.27□□□□□ -0.13
CNIH4Q9P003 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 INE1-201ENST00000456273 945 ntBASIC14.27□□□□□ -0.13
CNIH4Q9P003 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNIH4Q9P003 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CNIH4Q9P003 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNIH4Q9P003 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms