Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC015936.2-201ENST00000593177 259 ntBASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 AL109954.1-202ENST00000564051 2148 ntBASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 AL512384.1-201ENST00000406683 331 ntBASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 NME2P1-201ENST00000426182 414 ntBASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SDHAF3Q9NRP4 MROH4P-201ENST00000431302 1578 ntBASIC14□□□□□ -0.17
SDHAF3Q9NRP4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 AC138035.3-201ENST00000622706 2791 ntBASIC14□□□□□ -0.17
SDHAF3Q9NRP4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14□□□□□ -0.17
SDHAF3Q9NRP4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14□□□□□ -0.17
SDHAF3Q9NRP4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms