Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AC009078.2-202ENST00000463353 338 ntBASIC13.92□□□□□ -0.18
HMG20AQ9NP66 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 Z83851.2-201ENST00000609564 659 ntBASIC13.92□□□□□ -0.18
HMG20AQ9NP66 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AC010507.1-201ENST00000633895 436 ntBASIC13.92□□□□□ -0.18
HMG20AQ9NP66 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMG20AQ9NP66 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC023090.2-201ENST00000625182 2110 ntBASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.91□□□□□ -0.18
HMG20AQ9NP66 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 AC007064.4-201ENST00000637740 555 ntBASIC13.91□□□□□ -0.18
HMG20AQ9NP66 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.91□□□□□ -0.18
HMG20AQ9NP66 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMG20AQ9NP66 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HMG20AQ9NP66 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.9□□□□□ -0.18
HMG20AQ9NP66 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMG20AQ9NP66 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMG20AQ9NP66 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.9□□□□□ -0.18
HMG20AQ9NP66 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms