Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 MIR1909-201ENST00000411312 80 ntBASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 FAM197Y7-201ENST00000432892 766 ntBASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC104989.1-201ENST00000519711 778 ntBASIC17.88■□□□□ 0.45
RNF41Q9H4P4 IGHV3-71-201ENST00000523324 359 ntBASIC17.88■□□□□ 0.45
RNF41Q9H4P4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC017083.2-201ENST00000608069 979 ntBASIC17.88■□□□□ 0.45
RNF41Q9H4P4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 RHOXF1P1-202ENST00000635473 501 ntBASIC17.88■□□□□ 0.45
RNF41Q9H4P4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF41Q9H4P4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 POM121L8P-201ENST00000417732 1281 ntBASIC17.87■□□□□ 0.45
RNF41Q9H4P4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 POM121L9P-203ENST00000441984 1285 ntBASIC17.87■□□□□ 0.45
RNF41Q9H4P4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.87■□□□□ 0.45
RNF41Q9H4P4 FO681548.1-201ENST00000455617 1132 ntBASIC17.87■□□□□ 0.45
RNF41Q9H4P4 AC079316.1-201ENST00000548397 411 ntBASIC17.87■□□□□ 0.45
RNF41Q9H4P4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 AC138951.2-201ENST00000623455 1161 ntBASIC17.87■□□□□ 0.45
RNF41Q9H4P4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF41Q9H4P4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 AC006001.1-201ENST00000325130 474 ntBASIC17.86■□□□□ 0.45
RNF41Q9H4P4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 AC022210.1-201ENST00000449856 793 ntBASIC17.86■□□□□ 0.45
RNF41Q9H4P4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 AP005482.1-201ENST00000563722 1273 ntBASIC17.86■□□□□ 0.45
RNF41Q9H4P4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF41Q9H4P4 MIR6805-201ENST00000615055 62 ntBASIC17.86■□□□□ 0.45
RNF41Q9H4P4 AC006453.4-201ENST00000636949 1252 ntBASIC17.86■□□□□ 0.45
RNF41Q9H4P4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms