Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 AL645939.2-201ENST00000427340 991 ntBASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SERBP1P3-201ENST00000459980 809 ntBASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 HLA-V-204ENST00000476601 1289 ntBASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 AL138828.2-201ENST00000615812 383 ntBASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 FGD5P1-202ENST00000614866 2498 ntBASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 LINC00552-201ENST00000625151 2579 ntBASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CHRDL1Q9BU40 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 AC074338.1-201ENST00000416825 156 ntBASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 KLF2P3-201ENST00000451977 1087 ntBASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TEX28P1-201ENST00000613479 1221 ntBASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TEX28P2-201ENST00000617764 1221 ntBASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 AC091951.1-201ENST00000512854 2465 ntBASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHRDL1Q9BU40 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms