Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC10.11□□□□□ -0.79
LITAFQ99732 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 AP002414.3-201ENST00000589352 1468 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 AC090643.2-201ENST00000623442 2029 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC10.11□□□□□ -0.79
LITAFQ99732 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 FAM220BP-201ENST00000377689 816 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.11□□□□□ -0.79
LITAFQ99732 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
LITAFQ99732 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 SUOX-214ENST00000551841 906 ntTSL 3 BASIC10.11□□□□□ -0.79
LITAFQ99732 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC10.11□□□□□ -0.79
LITAFQ99732 AC105339.3-201ENST00000560043 636 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.11□□□□□ -0.79
LITAFQ99732 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 MIR4751-201ENST00000578027 74 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 REXO1L6P-202ENST00000619970 1078 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 AC072061.1-201ENST00000569710 2234 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 IER3-202ENST00000376377 1350 ntBASIC10.11□□□□□ -0.79
LITAFQ99732 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.11□□□□□ -0.79
LITAFQ99732 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LITAFQ99732 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LITAFQ99732 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LITAFQ99732 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LITAFQ99732 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
LITAFQ99732 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 264.6 ms