Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.57■□□□□ 0.08
CDCA3Q99618 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCA3Q99618 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 AL139384.1-201ENST00000612143 3047 ntBASIC15.57■□□□□ 0.08
CDCA3Q99618 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDCA3Q99618 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 CICP11-201ENST00000434745 2827 ntBASIC15.57■□□□□ 0.08
CDCA3Q99618 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCA3Q99618 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDCA3Q99618 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCA3Q99618 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCA3Q99618 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.56■□□□□ 0.08
CDCA3Q99618 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CDCA3Q99618 TSPY25P-201ENST00000429463 745 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.56■□□□□ 0.08
CDCA3Q99618 AL627422.1-201ENST00000434104 580 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 AL157792.1-201ENST00000488281 530 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCA3Q99618 GCOM2-201ENST00000509133 1104 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.56■□□□□ 0.08
CDCA3Q99618 SIGLEC18P-201ENST00000602271 909 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 MIR6756-201ENST00000616240 63 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 MIR6858-201ENST00000620733 67 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDCA3Q99618 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.56■□□□□ 0.08
CDCA3Q99618 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCA3Q99618 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.56■□□□□ 0.08
CDCA3Q99618 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.56■□□□□ 0.08
CDCA3Q99618 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDCA3Q99618 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDCA3Q99618 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.55■□□□□ 0.08
CDCA3Q99618 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 SALL4P5-201ENST00000419001 1760 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.55■□□□□ 0.08
CDCA3Q99618 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 LINC01165-201ENST00000445190 1623 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.55■□□□□ 0.08
CDCA3Q99618 CYP4F23P-201ENST00000593402 1579 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDCA3Q99618 LILRP1-201ENST00000444199 1370 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDCA3Q99618 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms