Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 AL360270.3-201ENST00000609118 1348 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 MSTO2P-201ENST00000314835 1709 ntBASIC12.76□□□□□ -0.37
CCL13Q99616 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL13Q99616 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL13Q99616 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCL13Q99616 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CCL13Q99616 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 ACKR1-201ENST00000368121 1240 ntBASIC12.75□□□□□ -0.37
CCL13Q99616 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.75□□□□□ -0.37
CCL13Q99616 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.75□□□□□ -0.37
CCL13Q99616 KLF2P2-201ENST00000416807 1039 ntBASIC12.75□□□□□ -0.37
CCL13Q99616 AC005034.1-201ENST00000426657 489 ntBASIC12.75□□□□□ -0.37
CCL13Q99616 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.75□□□□□ -0.37
CCL13Q99616 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 AC114812.1-204ENST00000449669 728 ntBASIC12.75□□□□□ -0.37
CCL13Q99616 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.75□□□□□ -0.37
CCL13Q99616 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.75□□□□□ -0.37
CCL13Q99616 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 AC134312.5-201ENST00000568031 1313 ntBASIC12.75□□□□□ -0.37
CCL13Q99616 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 MIR5189-201ENST00000577370 114 ntBASIC12.75□□□□□ -0.37
CCL13Q99616 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CCL13Q99616 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CCL13Q99616 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CCL13Q99616 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL13Q99616 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 LRRC59-203ENST00000576448 1531 ntBASIC12.74□□□□□ -0.37
CCL13Q99616 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms