Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 AC105917.1-201ENST00000506637 2539 ntBASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UBE2E2Q96LR5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC023310.1-201ENST00000554836 735 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 DUX4L47-201ENST00000566374 394 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC244669.2-201ENST00000612320 853 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 ENPP7P14-201ENST00000621765 1040 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SBF1P1-201ENST00000444527 5631 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AP002414.2-201ENST00000591780 3365 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 MROH4P-201ENST00000431302 1578 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2E2Q96LR5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2E2Q96LR5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 AC006001.1-201ENST00000325130 474 ntBASIC11.77□□□□□ -0.53
UBE2E2Q96LR5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms