Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC084121.3-201ENST00000641716 218 ntBASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AL928921.2-201ENST00000641325 2442 ntBASIC14.68□□□□□ -0.06
VPS33AQ96AX1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 Z97205.2-201ENST00000564697 1639 ntBASIC14.68□□□□□ -0.06
VPS33AQ96AX1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AL133267.1-201ENST00000398220 340 ntBASIC14.68□□□□□ -0.06
VPS33AQ96AX1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AC005829.1-201ENST00000570002 483 ntBASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.68□□□□□ -0.06
VPS33AQ96AX1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS33AQ96AX1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 HSPA7-201ENST00000445535 1927 ntBASIC14.67□□□□□ -0.06
VPS33AQ96AX1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 MIR4469-201ENST00000583919 79 ntBASIC14.67□□□□□ -0.06
VPS33AQ96AX1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS33AQ96AX1 MIR6069-201ENST00000620069 79 ntBASIC14.67□□□□□ -0.06
VPS33AQ96AX1 LINC00628-201ENST00000628516 1289 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms