Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AP005018.1-201ENST00000525475 301 ntBASIC13.36□□□□□ -0.27
TMEM54Q969K7 AC068587.3-201ENST00000526613 355 ntBASIC13.36□□□□□ -0.27
TMEM54Q969K7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AL596325.1-201ENST00000563991 1082 ntBASIC13.36□□□□□ -0.27
TMEM54Q969K7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AL358472.5-202ENST00000641448 1267 ntBASIC13.36□□□□□ -0.27
TMEM54Q969K7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 AC007292.2-201ENST00000593524 1812 ntBASIC13.35□□□□□ -0.27
TMEM54Q969K7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 AC007389.4-201ENST00000454674 793 ntBASIC13.35□□□□□ -0.27
TMEM54Q969K7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 LINC02228-204ENST00000642115 2962 ntBASIC13.35□□□□□ -0.27
TMEM54Q969K7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM54Q969K7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM54Q969K7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms