Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC015818.8-201ENST00000587907 1519 ntBASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 RPSAP36-202ENST00000494591 1261 ntBASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AL008638.5-201ENST00000623814 1298 ntBASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC068587.10-201ENST00000641210 219 ntBASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 WASH3P-207ENST00000560956 1394 ntBASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 AC104982.3-201ENST00000581995 514 ntBASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 PPT1-215ENST00000641471 2368 ntBASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP6V0A1Q93050 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
ATP6V0A1Q93050 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 AL359258.3-201ENST00000622910 2331 ntBASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 CNN2P10-201ENST00000443067 918 ntBASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 AP006547.1-201ENST00000563435 692 ntBASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 AP000845.1-201ENST00000581677 2131 ntBASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP6V0A1Q93050 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms