Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S1Q92572 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.46□□□□□ -0.26
AP3S1Q92572 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S1Q92572 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S1Q92572 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.46□□□□□ -0.26
AP3S1Q92572 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
AP3S1Q92572 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.46□□□□□ -0.26
AP3S1Q92572 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
AP3S1Q92572 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S1Q92572 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP3S1Q92572 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
AP3S1Q92572 IER3-202ENST00000376377 1350 ntBASIC13.45□□□□□ -0.26
AP3S1Q92572 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S1Q92572 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S1Q92572 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
AP3S1Q92572 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S1Q92572 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S1Q92572 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S1Q92572 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
AP3S1Q92572 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.45□□□□□ -0.26
AP3S1Q92572 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
AP3S1Q92572 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
AP3S1Q92572 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP3S1Q92572 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP3S1Q92572 REXO1L4P-201ENST00000605109 1937 ntBASIC13.45□□□□□ -0.26
AP3S1Q92572 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.44□□□□□ -0.26
AP3S1Q92572 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.44□□□□□ -0.26
AP3S1Q92572 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AP3S1Q92572 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.44□□□□□ -0.26
AP3S1Q92572 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.44□□□□□ -0.26
AP3S1Q92572 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.44□□□□□ -0.26
AP3S1Q92572 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
AP3S1Q92572 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.44□□□□□ -0.26
AP3S1Q92572 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.44□□□□□ -0.26
AP3S1Q92572 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.44□□□□□ -0.26
AP3S1Q92572 PCED1CP-201ENST00000419887 785 ntBASIC13.44□□□□□ -0.26
AP3S1Q92572 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.44□□□□□ -0.26
AP3S1Q92572 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.44□□□□□ -0.26
AP3S1Q92572 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.44□□□□□ -0.26
AP3S1Q92572 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.44□□□□□ -0.26
AP3S1Q92572 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.44□□□□□ -0.26
AP3S1Q92572 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.44□□□□□ -0.26
AP3S1Q92572 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
AP3S1Q92572 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 NPAP1P7-201ENST00000613027 823 ntBASIC13.44□□□□□ -0.26
AP3S1Q92572 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S1Q92572 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms