Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 CHMP1AP1-201ENST00000445563 662 ntBASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 ZNF767P-206ENST00000513792 565 ntBASIC15.18■□□□□ 0.02
CHD5Q8TDI0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AC009955.4-201ENST00000597192 544 ntBASIC15.18■□□□□ 0.02
CHD5Q8TDI0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD5Q8TDI0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 SHC1P1-201ENST00000425230 1745 ntBASIC15.17■□□□□ 0.02
CHD5Q8TDI0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.17■□□□□ 0.02
CHD5Q8TDI0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 AC007292.2-201ENST00000593524 1812 ntBASIC15.17■□□□□ 0.02
CHD5Q8TDI0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 MIR1908-201ENST00000410394 80 ntBASIC15.17■□□□□ 0.02
CHD5Q8TDI0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 AL354702.1-201ENST00000442006 1960 ntBASIC15.17■□□□□ 0.02
CHD5Q8TDI0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHD5Q8TDI0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHD5Q8TDI0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms