Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 AC079781.5-202ENST00000641784 3743 ntBASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
DNAAF1Q8NEP3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 KRT8P12-202ENST00000472924 1397 ntBASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 RBPMS2P1-201ENST00000437762 623 ntBASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 AC093520.2-201ENST00000561830 333 ntBASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 AC087386.2-201ENST00000623212 4637 ntBASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.47□□□□□ -0.25
DNAAF1Q8NEP3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 GPS2P2-201ENST00000430745 888 ntBASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 HIST3H2BA-201ENST00000436555 524 ntBASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 SPDYE14P-201ENST00000442619 822 ntBASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 RN7SL828P-201ENST00000607615 303 ntBASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 AL133215.2-201ENST00000609242 977 ntBASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 AC003101.2-201ENST00000612557 442 ntBASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 AC009093.7-201ENST00000623853 1223 ntBASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms