Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC4A11Q8NBS3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC4A11Q8NBS3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC4A11Q8NBS3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC4A11Q8NBS3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 PKD1P5-201ENST00000532415 10291 ntBASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 FGD5P1-202ENST00000614866 2498 ntBASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 CICP24-201ENST00000605464 2705 ntBASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC4A11Q8NBS3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 AC013726.1-201ENST00000563747 2285 ntBASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 AC112492.5-201ENST00000421897 457 ntBASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 FO681548.1-201ENST00000455617 1132 ntBASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 KRT17P8-201ENST00000540749 863 ntBASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 RN7SL48P-201ENST00000579283 293 ntBASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 ENPP7P14-201ENST00000621765 1040 ntBASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 AC132938.4-201ENST00000623835 848 ntBASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC4A11Q8NBS3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 AC099063.4-201ENST00000641099 1602 ntBASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC4A11Q8NBS3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms