Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 AC106886.1-201ENST00000568660 600 ntBASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 AL162274.1-201ENST00000617191 1098 ntBASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 CICP24-201ENST00000605464 2705 ntBASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 FER1L4-210ENST00000615531 5998 ntBASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ZIC4Q8N9L1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 FO681548.1-201ENST00000455617 1132 ntBASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 CROCCP4-201ENST00000457096 498 ntBASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 FTH1P14-201ENST00000482930 551 ntBASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 RN7SL48P-201ENST00000579283 293 ntBASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ZIC4Q8N9L1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 AC079776.1-201ENST00000401540 1152 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 POM121L8P-201ENST00000417732 1281 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 AC016694.1-201ENST00000434179 700 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 POM121L9P-203ENST00000441984 1285 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 AC007551.1-201ENST00000457394 519 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms