Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CICP23-201ENST00000605013 2741 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 MIR6769A-201ENST00000617340 73 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AC004522.1-201ENST00000419978 654 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AC092638.2-201ENST00000441105 947 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 FTH1P22-201ENST00000456305 520 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AC024293.1-201ENST00000467930 498 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AC133540.1-201ENST00000620845 1019 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 HCG27-204ENST00000424675 895 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 HNRNPA1P36-201ENST00000521313 955 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC018629.1-201ENST00000623381 1736 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 PCDHGB8P-201ENST00000502926 1973 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AL645933.1-201ENST00000440087 609 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC011247.3-201ENST00000603297 438 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 ZBTB45P1-201ENST00000452761 1456 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 MRPL37P1-201ENST00000592451 1337 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC006058.4-201ENST00000624016 1670 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 COX20P1-201ENST00000366529 357 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AL357373.1-201ENST00000394974 322 ntBASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13BQ7Z7G8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms