Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 AC007967.4-201ENST00000614700 386 ntBASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 POM121L4P-202ENST00000427789 1891 ntBASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 HSPA7-201ENST00000445535 1927 ntBASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 AP001972.5-201ENST00000624624 2338 ntBASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 AC004987.2-201ENST00000395959 1148 ntBASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 AC069262.1-201ENST00000539058 672 ntBASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 MIR4453-201ENST00000584019 89 ntBASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 AL691432.1-201ENST00000596308 1422 ntBASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM53Q6P2H8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 TRIM80P-201ENST00000455685 2848 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms