Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 AL645937.2-201ENST00000396808 931 ntBASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 TDH-203ENST00000531764 1110 ntBASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 BX539320.1-201ENST00000623759 877 ntBASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 AC005252.2-201ENST00000624630 1141 ntBASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 LINC00528-201ENST00000600723 2160 ntBASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 AL390755.1-201ENST00000623716 2027 ntBASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 AC068587.3-201ENST00000526613 355 ntBASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 CLUHP6-201ENST00000580789 941 ntBASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 AC008735.3-201ENST00000596646 500 ntBASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 RPSAP52-203ENST00000622976 1023 ntBASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC39BQ5VTQ0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 AP001582.1-201ENST00000525856 295 ntBASIC15.86■□□□□ 0.13
TTC39BQ5VTQ0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms