Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KRT18P36-201ENST00000411618 1276 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.48□□□□□ -0.09
RIF1Q5UIP0 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RIF1Q5UIP0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AC005915.1-201ENST00000624912 2018 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AL157407.1-201ENST00000435784 904 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 URB1-AS1-201ENST00000534991 831 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AC140113.1-201ENST00000603467 169 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AC133540.1-201ENST00000620845 1019 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AC106886.4-201ENST00000623557 2502 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 RNF165-205ENST00000588679 2904 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 BCRP4-201ENST00000506079 804 ntBASIC14.47□□□□□ -0.09
RIF1Q5UIP0 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RIF1Q5UIP0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.46□□□□□ -0.09
RIF1Q5UIP0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 OR3A1-202ENST00000615105 966 ntBASIC14.46□□□□□ -0.09
RIF1Q5UIP0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RIF1Q5UIP0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms