Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
DDR1Q08345 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.56■□□□□ 0.56
DDR1Q08345 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.56■□□□□ 0.56
DDR1Q08345 AC133540.1-201ENST00000620845 1019 ntBASIC18.56■□□□□ 0.56
DDR1Q08345 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDR1Q08345 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.56■□□□□ 0.56
DDR1Q08345 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.56■□□□□ 0.56
DDR1Q08345 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.56■□□□□ 0.56
DDR1Q08345 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
DDR1Q08345 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDR1Q08345 AC012508.2-201ENST00000567613 1472 ntBASIC18.56■□□□□ 0.56
DDR1Q08345 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
DDR1Q08345 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDR1Q08345 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDR1Q08345 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDR1Q08345 AC105250.1-201ENST00000509378 2057 ntBASIC18.56■□□□□ 0.56
DDR1Q08345 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.56■□□□□ 0.56
DDR1Q08345 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDR1Q08345 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDR1Q08345 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.56■□□□□ 0.56
DDR1Q08345 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.56■□□□□ 0.56
DDR1Q08345 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
DDR1Q08345 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.55■□□□□ 0.56
DDR1Q08345 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.55■□□□□ 0.56
DDR1Q08345 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.55■□□□□ 0.56
DDR1Q08345 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
DDR1Q08345 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.55■□□□□ 0.56
DDR1Q08345 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DDR1Q08345 KRT18P36-201ENST00000411618 1276 ntBASIC18.55■□□□□ 0.56
DDR1Q08345 BANF1P3-201ENST00000412556 261 ntBASIC18.55■□□□□ 0.56
DDR1Q08345 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DDR1Q08345 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.55■□□□□ 0.56
DDR1Q08345 LYPLA2P1-203ENST00000447689 696 ntBASIC18.55■□□□□ 0.56
DDR1Q08345 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.55■□□□□ 0.56
DDR1Q08345 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 AL157792.1-201ENST00000488281 530 ntBASIC18.55■□□□□ 0.56
DDR1Q08345 AC026410.1-201ENST00000507366 1101 ntBASIC18.55■□□□□ 0.56
DDR1Q08345 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.55■□□□□ 0.56
DDR1Q08345 AC107464.3-201ENST00000609172 737 ntBASIC18.55■□□□□ 0.56
DDR1Q08345 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
DDR1Q08345 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.55■□□□□ 0.56
DDR1Q08345 AC092299.1-201ENST00000632679 757 ntBASIC18.55■□□□□ 0.56
DDR1Q08345 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DDR1Q08345 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
DDR1Q08345 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
DDR1Q08345 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.55■□□□□ 0.56
DDR1Q08345 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
DDR1Q08345 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDR1Q08345 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.55■□□□□ 0.56
DDR1Q08345 AC018629.1-201ENST00000623381 1736 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.54■□□□□ 0.56
DDR1Q08345 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.54■□□□□ 0.56
DDR1Q08345 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.54■□□□□ 0.56
DDR1Q08345 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 Z69890.1-201ENST00000382990 339 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.54■□□□□ 0.56
DDR1Q08345 AL807761.2-201ENST00000422849 729 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 XBP1P1-201ENST00000436573 652 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 RPSAP15-201ENST00000448168 861 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.54■□□□□ 0.56
DDR1Q08345 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.54■□□□□ 0.56
DDR1Q08345 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.54■□□□□ 0.56
DDR1Q08345 AC093752.3-201ENST00000567343 901 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.54■□□□□ 0.56
DDR1Q08345 BX088702.1-201ENST00000610784 235 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.54■□□□□ 0.56
DDR1Q08345 AC090340.1-201ENST00000620778 4980 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.54■□□□□ 0.56
DDR1Q08345 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DDR1Q08345 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDR1Q08345 IL9RP3-201ENST00000442856 1674 ntBASIC18.54■□□□□ 0.56
DDR1Q08345 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.53■□□□□ 0.56
DDR1Q08345 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms