Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRNB3Q05901 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.49□□□□□ -0.09
CHRNB3Q05901 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRNB3Q05901 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRNB3Q05901 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 AL031595.1-201ENST00000623969 4709 ntBASIC14.48□□□□□ -0.09
CHRNB3Q05901 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 AC092135.3-201ENST00000624151 1846 ntBASIC14.48□□□□□ -0.09
CHRNB3Q05901 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRNB3Q05901 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.48□□□□□ -0.09
CHRNB3Q05901 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 AP001267.2-201ENST00000532619 2086 ntBASIC14.47□□□□□ -0.09
CHRNB3Q05901 AC012508.2-201ENST00000567613 1472 ntBASIC14.47□□□□□ -0.09
CHRNB3Q05901 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 AC092902.6-201ENST00000641783 218 ntBASIC14.47□□□□□ -0.09
CHRNB3Q05901 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHRNB3Q05901 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CHRNB3Q05901 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms