Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK3Q00526 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK3Q00526 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.9□□□□□ -0.02
CDK3Q00526 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.9□□□□□ -0.02
CDK3Q00526 AP006547.1-201ENST00000563435 692 ntBASIC14.9□□□□□ -0.02
CDK3Q00526 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.9□□□□□ -0.02
CDK3Q00526 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK3Q00526 RN7SL713P-201ENST00000582127 302 ntBASIC14.9□□□□□ -0.02
CDK3Q00526 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 MIR6799-201ENST00000620297 69 ntBASIC14.9□□□□□ -0.02
CDK3Q00526 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.9□□□□□ -0.02
CDK3Q00526 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.9□□□□□ -0.02
CDK3Q00526 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
CDK3Q00526 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.9□□□□□ -0.02
CDK3Q00526 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDK3Q00526 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK3Q00526 FLJ16779-201ENST00000612722 7638 ntBASIC14.9□□□□□ -0.02
CDK3Q00526 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.9□□□□□ -0.02
CDK3Q00526 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDK3Q00526 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CDK3Q00526 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 FAM86MP-201ENST00000340703 885 ntBASIC14.89□□□□□ -0.03
CDK3Q00526 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.89□□□□□ -0.03
CDK3Q00526 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 ACTBP11-201ENST00000436287 1126 ntBASIC14.89□□□□□ -0.03
CDK3Q00526 HOMER2P2-201ENST00000451621 847 ntBASIC14.89□□□□□ -0.03
CDK3Q00526 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.89□□□□□ -0.03
CDK3Q00526 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 AC073413.1-201ENST00000603927 732 ntBASIC14.89□□□□□ -0.03
CDK3Q00526 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.89□□□□□ -0.03
CDK3Q00526 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDK3Q00526 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDK3Q00526 AC091951.1-201ENST00000512854 2465 ntBASIC14.89□□□□□ -0.03
CDK3Q00526 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.89□□□□□ -0.03
CDK3Q00526 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDK3Q00526 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 FKBP4P6-201ENST00000457486 1332 ntBASIC14.89□□□□□ -0.03
CDK3Q00526 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK3Q00526 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK3Q00526 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 AC006486.2-201ENST00000624246 2199 ntBASIC14.88□□□□□ -0.03
CDK3Q00526 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK3Q00526 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK3Q00526 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK3Q00526 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDK3Q00526 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.88□□□□□ -0.03
CDK3Q00526 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.88□□□□□ -0.03
CDK3Q00526 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK3Q00526 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms