Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
CX3CL1P78423 AC000095.1-201ENST00000603208 874 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 AC116165.1-201ENST00000611806 668 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CX3CL1P78423 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.33□□□□□ -0.44
CX3CL1P78423 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.33□□□□□ -0.44
CX3CL1P78423 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.33□□□□□ -0.44
CX3CL1P78423 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CX3CL1P78423 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 AC148477.4-201ENST00000613430 1793 ntBASIC12.33□□□□□ -0.44
CX3CL1P78423 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.33□□□□□ -0.44
CX3CL1P78423 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CX3CL1P78423 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CX3CL1P78423 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CX3CL1P78423 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 CICP14-201ENST00000629111 2732 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CX3CL1P78423 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 AC067750.1-201ENST00000608826 6545 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CX3CL1P78423 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 AC093004.1-201ENST00000508850 424 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.32□□□□□ -0.44
CX3CL1P78423 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 AC036164.1-201ENST00000570544 333 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.32□□□□□ -0.44
CX3CL1P78423 AC025181.2-201ENST00000606994 802 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 AL391069.4-201ENST00000609583 481 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 AC004790.1-201ENST00000612686 536 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.32□□□□□ -0.44
CX3CL1P78423 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.32□□□□□ -0.44
CX3CL1P78423 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 CLK3P2-201ENST00000427566 1453 ntBASIC12.32□□□□□ -0.44
CX3CL1P78423 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CX3CL1P78423 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CX3CL1P78423 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CX3CL1P78423 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CX3CL1P78423 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CX3CL1P78423 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CX3CL1P78423 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CX3CL1P78423 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CX3CL1P78423 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CX3CL1P78423 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.31□□□□□ -0.44
CX3CL1P78423 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms