Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.4□□□□□ -0.1
RAE1P78406 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.39□□□□□ -0.11
RAE1P78406 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAE1P78406 KLF2P2-201ENST00000416807 1039 ntBASIC14.39□□□□□ -0.11
RAE1P78406 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.39□□□□□ -0.11
RAE1P78406 EIF3FP3-201ENST00000434851 1086 ntBASIC14.39□□□□□ -0.11
RAE1P78406 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.39□□□□□ -0.11
RAE1P78406 FAM207CP-201ENST00000443486 507 ntBASIC14.39□□□□□ -0.11
RAE1P78406 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
RAE1P78406 AC026434.2-201ENST00000506094 1078 ntBASIC14.39□□□□□ -0.11
RAE1P78406 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RAE1P78406 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.39□□□□□ -0.11
RAE1P78406 SPCS2P1-201ENST00000561636 679 ntBASIC14.39□□□□□ -0.11
RAE1P78406 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.39□□□□□ -0.11
RAE1P78406 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 CTBP2P3-201ENST00000585629 1255 ntBASIC14.39□□□□□ -0.11
RAE1P78406 AC004233.3-201ENST00000607794 1269 ntBASIC14.39□□□□□ -0.11
RAE1P78406 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.39□□□□□ -0.11
RAE1P78406 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAE1P78406 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAE1P78406 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAE1P78406 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.38□□□□□ -0.11
RAE1P78406 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.38□□□□□ -0.11
RAE1P78406 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAE1P78406 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.38□□□□□ -0.11
RAE1P78406 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.38□□□□□ -0.11
RAE1P78406 AC114812.1-204ENST00000449669 728 ntBASIC14.38□□□□□ -0.11
RAE1P78406 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.38□□□□□ -0.11
RAE1P78406 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RAE1P78406 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.38□□□□□ -0.11
RAE1P78406 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.38□□□□□ -0.11
RAE1P78406 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.38□□□□□ -0.11
RAE1P78406 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.38□□□□□ -0.11
RAE1P78406 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.38□□□□□ -0.11
RAE1P78406 AC133539.2-201ENST00000604757 467 ntBASIC14.38□□□□□ -0.11
RAE1P78406 AL096865.1-201ENST00000606796 927 ntBASIC14.38□□□□□ -0.11
RAE1P78406 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAE1P78406 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAE1P78406 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.38□□□□□ -0.11
RAE1P78406 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.38□□□□□ -0.11
RAE1P78406 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAE1P78406 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms