Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC022217.1-201ENST00000521069 738 ntBASIC12.37□□□□□ -0.43
LMO4P61968 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.37□□□□□ -0.43
LMO4P61968 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 MIR3619-201ENST00000579667 83 ntBASIC12.37□□□□□ -0.43
LMO4P61968 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 RN7SL163P-201ENST00000583100 276 ntBASIC12.37□□□□□ -0.43
LMO4P61968 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
LMO4P61968 AC008825.2-201ENST00000603374 718 ntBASIC12.37□□□□□ -0.43
LMO4P61968 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO4P61968 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.37□□□□□ -0.43
LMO4P61968 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO4P61968 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO4P61968 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO4P61968 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LMO4P61968 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LMO4P61968 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO4P61968 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LMO4P61968 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LMO4P61968 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO4P61968 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO4P61968 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO4P61968 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO4P61968 FAM58BP-201ENST00000439056 645 ntBASIC12.36□□□□□ -0.43
LMO4P61968 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
LMO4P61968 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.36□□□□□ -0.43
LMO4P61968 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO4P61968 RHOQP1-201ENST00000555758 579 ntBASIC12.36□□□□□ -0.43
LMO4P61968 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO4P61968 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 AC106872.11-201ENST00000605838 421 ntBASIC12.36□□□□□ -0.43
LMO4P61968 AL645939.5-201ENST00000606834 243 ntBASIC12.36□□□□□ -0.43
LMO4P61968 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
LMO4P61968 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
LMO4P61968 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LMO4P61968 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
LMO4P61968 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO4P61968 HYMAI-201ENST00000635591 3347 ntBASIC12.36□□□□□ -0.43
LMO4P61968 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 AC006058.4-201ENST00000624016 1670 ntBASIC12.35□□□□□ -0.43
LMO4P61968 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
LMO4P61968 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LMO4P61968 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
LMO4P61968 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO4P61968 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms