Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CDC42P60953 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42P60953 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC42P60953 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CDC42P60953 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CDC42P60953 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDC42P60953 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC42P60953 AC007967.2-201ENST00000432613 625 ntBASIC13.97□□□□□ -0.17
CDC42P60953 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.97□□□□□ -0.17
CDC42P60953 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC42P60953 AC106730.1-201ENST00000566722 1090 ntBASIC13.97□□□□□ -0.17
CDC42P60953 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.97□□□□□ -0.17
CDC42P60953 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.97□□□□□ -0.17
CDC42P60953 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.97□□□□□ -0.17
CDC42P60953 AL513190.1-201ENST00000621254 727 ntBASIC13.97□□□□□ -0.17
CDC42P60953 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDC42P60953 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CDC42P60953 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42P60953 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CDC42P60953 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC42P60953 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDC42P60953 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDC42P60953 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.96□□□□□ -0.17
CDC42P60953 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDC42P60953 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CDC42P60953 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 AL137784.3-201ENST00000623858 2288 ntBASIC13.96□□□□□ -0.17
CDC42P60953 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.96□□□□□ -0.17
CDC42P60953 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 AL353705.2-201ENST00000428243 662 ntBASIC13.96□□□□□ -0.17
CDC42P60953 SPDYE11-202ENST00000450699 704 ntBASIC13.96□□□□□ -0.17
CDC42P60953 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC42P60953 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
CDC42P60953 AC243562.1-201ENST00000560672 389 ntBASIC13.96□□□□□ -0.17
CDC42P60953 AC034105.1-201ENST00000563488 319 ntBASIC13.96□□□□□ -0.17
CDC42P60953 AC145285.3-201ENST00000564603 959 ntBASIC13.96□□□□□ -0.17
CDC42P60953 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 SPDYE9P-201ENST00000570642 692 ntBASIC13.96□□□□□ -0.17
CDC42P60953 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CDC42P60953 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 SPDYE10P-202ENST00000612005 668 ntBASIC13.96□□□□□ -0.17
CDC42P60953 SPDYE8P-202ENST00000612377 668 ntBASIC13.96□□□□□ -0.17
CDC42P60953 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC42P60953 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDC42P60953 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC42P60953 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.96□□□□□ -0.18
CDC42P60953 AC104109.2-201ENST00000602919 1418 ntBASIC13.96□□□□□ -0.18
CDC42P60953 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CDC42P60953 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CDC42P60953 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms