Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.15□□□□□ -0.3
HCFC1P51610 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.15□□□□□ -0.3
HCFC1P51610 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.15□□□□□ -0.3
HCFC1P51610 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 AC005740.2-201ENST00000511085 419 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 AC009779.1-201ENST00000551138 283 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.15□□□□□ -0.3
HCFC1P51610 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.15□□□□□ -0.3
HCFC1P51610 Z98259.2-201ENST00000641583 609 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HCFC1P51610 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 HCG11-201ENST00000411553 5696 ntBASIC13.14□□□□□ -0.31
HCFC1P51610 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
HCFC1P51610 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 Z97180.1-201ENST00000445173 988 ntBASIC13.14□□□□□ -0.31
HCFC1P51610 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.14□□□□□ -0.31
HCFC1P51610 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.14□□□□□ -0.31
HCFC1P51610 MIR7845-201ENST00000618396 99 ntBASIC13.14□□□□□ -0.31
HCFC1P51610 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 AC092384.3-202ENST00000564646 2873 ntBASIC13.14□□□□□ -0.31
HCFC1P51610 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HCFC1P51610 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.14□□□□□ -0.31
HCFC1P51610 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HCFC1P51610 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.13□□□□□ -0.31
HCFC1P51610 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.13□□□□□ -0.31
HCFC1P51610 AC008267.1-201ENST00000474858 1069 ntBASIC13.13□□□□□ -0.31
HCFC1P51610 IGLV3-15-201ENST00000518356 244 ntBASIC13.13□□□□□ -0.31
HCFC1P51610 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HCFC1P51610 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms