Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC1A1P43005 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SLC1A1P43005 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC1A1P43005 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC1A1P43005 AL662799.1-202ENST00000614205 422 ntBASIC15.92■□□□□ 0.14
SLC1A1P43005 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC1A1P43005 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SLC1A1P43005 PRSS30P-206ENST00000641773 873 ntBASIC15.92■□□□□ 0.14
SLC1A1P43005 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC1A1P43005 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC1A1P43005 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SLC1A1P43005 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SLC1A1P43005 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC1A1P43005 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC1A1P43005 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A1P43005 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC1A1P43005 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SLC1A1P43005 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC1A1P43005 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 AL512638.1-201ENST00000457493 794 ntBASIC15.91■□□□□ 0.14
SLC1A1P43005 TPT1P11-201ENST00000458482 498 ntBASIC15.91■□□□□ 0.14
SLC1A1P43005 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 DOC2GP-202ENST00000514950 1163 ntBASIC15.91■□□□□ 0.14
SLC1A1P43005 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC1A1P43005 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC1A1P43005 TPRX2P-201ENST00000535362 881 ntBASIC15.91■□□□□ 0.14
SLC1A1P43005 AC104794.3-201ENST00000566840 1248 ntBASIC15.91■□□□□ 0.14
SLC1A1P43005 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 AC015802.1-201ENST00000588104 1449 ntBASIC15.91■□□□□ 0.14
SLC1A1P43005 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
SLC1A1P43005 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC1A1P43005 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SLC1A1P43005 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A1P43005 AC023090.2-201ENST00000625182 2110 ntBASIC15.91■□□□□ 0.14
SLC1A1P43005 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A1P43005 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLC1A1P43005 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC1A1P43005 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A1P43005 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A1P43005 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A1P43005 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A1P43005 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A1P43005 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A1P43005 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A1P43005 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms