Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM23P36406 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM23P36406 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 HOMER2P2-201ENST00000451621 847 ntBASIC14.93□□□□□ -0.02
TRIM23P36406 COX5BP1-201ENST00000507622 393 ntBASIC14.93□□□□□ -0.02
TRIM23P36406 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM23P36406 FAM86HP-204ENST00000513466 959 ntBASIC14.93□□□□□ -0.02
TRIM23P36406 AP003171.2-201ENST00000528208 925 ntBASIC14.93□□□□□ -0.02
TRIM23P36406 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM23P36406 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 RN7SL713P-201ENST00000582127 302 ntBASIC14.93□□□□□ -0.02
TRIM23P36406 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM23P36406 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM23P36406 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRIM23P36406 PPT1-215ENST00000641471 2368 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 BRWD1P1-201ENST00000401091 371 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 GOLGA2P4-201ENST00000441462 777 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM23P36406 AL391280.1-201ENST00000506969 1062 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM23P36406 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM23P36406 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 MIR4538-201ENST00000581377 78 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 OR10B1P-201ENST00000601666 907 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM23P36406 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
TRIM23P36406 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM23P36406 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.92□□□□□ -0.02
TRIM23P36406 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM23P36406 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 AC015818.8-201ENST00000587907 1519 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 AP000593.2-201ENST00000542775 1433 ntBASIC14.92□□□□□ -0.02
TRIM23P36406 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM23P36406 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM23P36406 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM23P36406 REXO1L2P-201ENST00000425429 2069 ntBASIC14.91□□□□□ -0.02
TRIM23P36406 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRIM23P36406 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM23P36406 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM23P36406 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms