Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 AC016700.1-201ENST00000429424 312 ntBASIC17.31■□□□□ 0.36
COPB2P35606 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.31■□□□□ 0.36
COPB2P35606 TUBB8P8-201ENST00000458717 1058 ntBASIC17.31■□□□□ 0.36
COPB2P35606 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.31■□□□□ 0.36
COPB2P35606 AC106794.1-201ENST00000506935 792 ntBASIC17.31■□□□□ 0.36
COPB2P35606 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.31■□□□□ 0.36
COPB2P35606 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.31■□□□□ 0.36
COPB2P35606 AL021578.1-201ENST00000613646 709 ntBASIC17.31■□□□□ 0.36
COPB2P35606 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.31■□□□□ 0.36
COPB2P35606 AC138627.1-207ENST00000641560 1006 ntBASIC17.31■□□□□ 0.36
COPB2P35606 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COPB2P35606 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.31■□□□□ 0.36
COPB2P35606 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COPB2P35606 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.31■□□□□ 0.36
COPB2P35606 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.31■□□□□ 0.36
COPB2P35606 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.31■□□□□ 0.36
COPB2P35606 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 AP003680.1-201ENST00000598970 3660 ntBASIC17.31■□□□□ 0.36
COPB2P35606 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPB2P35606 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 AC021723.1-201ENST00000486306 515 ntBASIC17.3■□□□□ 0.36
COPB2P35606 AC026434.2-201ENST00000506094 1078 ntBASIC17.3■□□□□ 0.36
COPB2P35606 AC005740.2-201ENST00000511085 419 ntBASIC17.3■□□□□ 0.36
COPB2P35606 RNA5SP423-201ENST00000517127 109 ntBASIC17.3■□□□□ 0.36
COPB2P35606 AC044849.1-201ENST00000519737 1188 ntBASIC17.3■□□□□ 0.36
COPB2P35606 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.3■□□□□ 0.36
COPB2P35606 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 AC100757.4-201ENST00000626934 759 ntBASIC17.3■□□□□ 0.36
COPB2P35606 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COPB2P35606 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 AC092127.1-201ENST00000567093 3455 ntBASIC17.3■□□□□ 0.36
COPB2P35606 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.3■□□□□ 0.36
COPB2P35606 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPB2P35606 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.29■□□□□ 0.36
COPB2P35606 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.29■□□□□ 0.36
COPB2P35606 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms