Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
EPHA3P29320 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 AL035456.1-201ENST00000456064 1369 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 GPS2P2-201ENST00000430745 888 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 RBPMS2P1-201ENST00000437762 623 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 SPDYE14P-201ENST00000442619 822 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 CEND1P1-201ENST00000451006 455 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.85□□□□□ -0.03
EPHA3P29320 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 AL079307.3-201ENST00000556114 283 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 AC093520.2-201ENST00000561830 333 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.85□□□□□ -0.03
EPHA3P29320 MIR6069-201ENST00000620069 79 ntBASIC14.85□□□□□ -0.03
EPHA3P29320 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA3P29320 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA3P29320 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
EPHA3P29320 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EPHA3P29320 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
EPHA3P29320 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
EPHA3P29320 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA3P29320 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 ELL2P1-201ENST00000413990 1906 ntBASIC14.84□□□□□ -0.03
EPHA3P29320 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA3P29320 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA3P29320 AL627223.1-201ENST00000416693 442 ntBASIC14.84□□□□□ -0.03
EPHA3P29320 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA3P29320 AC004832.2-201ENST00000426397 482 ntBASIC14.84□□□□□ -0.03
EPHA3P29320 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.84□□□□□ -0.03
EPHA3P29320 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA3P29320 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.84□□□□□ -0.03
EPHA3P29320 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.84□□□□□ -0.03
EPHA3P29320 AC025048.3-201ENST00000590609 569 ntBASIC14.84□□□□□ -0.03
EPHA3P29320 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA3P29320 AC005702.4-201ENST00000618393 416 ntBASIC14.84□□□□□ -0.03
EPHA3P29320 LINC00628-201ENST00000628516 1289 ntBASIC14.84□□□□□ -0.03
EPHA3P29320 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA3P29320 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
EPHA3P29320 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms